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USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: CSK2B_HUMAN




USC-OGP 2-DE database:  CSK2B_HUMAN


CSK2B_HUMAN


General information about the entry
View entry in simple text format
Entry nameCSK2B_HUMAN
Primary accession numberP67870
Secondary accession number(s) P13862
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Casein kinase II subunit beta; Short=CK II beta; AltName: Full=Phosvitin; AltName: Full=Protein G5a;.
Gene nameName=CSNK2B
Synonyms=CK2N, G5A
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=5.13; Mw=26515

Cross-references
UniProtKB/Swiss-ProtP67870; CSK2B_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameCSK2B_HUMAN
Primary accession numberP67870
Secondary accession number(s) B0UXA9 P07312 P13862 Q4VX47
Sequence was last modified on October 11, 2004 (version 1)
Annotations were last modified on March 15, 2017 (version 148)
Name and origin of the protein
DescriptionRecName: Full=Casein kinase II subunit beta; Short=CK II beta; AltName: Full=Phosvitin; AltName: Full=Protein G5a;
Gene nameName=CSNK2B
Synonyms=CK2N, G5A
Encoded onName=CSNK2B; Synonyms=CK2N, G5A
Keywords3D-structure; Acetylation; Complete proteome; Isopeptide bond; Metal-binding; Phosphoprotein; Reference proteome; Ubl conjugation; Wnt signaling pathway; Zinc.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX16937; CAA34811.1; -; mRNA
EMBLX16312; CAA34379.1; -; mRNA
EMBLM30448; AAA52123.1; -; mRNA
EMBLX57152; CAA40442.1; -; Genomic_DNA
EMBLAY113186; AAM50092.1; -; mRNA
EMBLCR541699; CAG46500.1; -; mRNA
EMBLAF129756; AAD18081.1; -; Genomic_DNA
EMBLBA000025; BAB63386.1; -; Genomic_DNA
EMBLDQ314868; ABC40727.1; -; Genomic_DNA
EMBLAK311860; BAG34801.1; -; mRNA
EMBLAL662899; CAI96141.1; -; Genomic_DNA
EMBLAL662899; CAI18393.2; ALT_INIT; Genomic_DNA
EMBLAL670886; CAI17800.1; -; Genomic_DNA
EMBLAL805934; CAI18523.1; -; Genomic_DNA
EMBLBX511262; CAM45825.1; -; Genomic_DNA
EMBLCR753842; CAQ06572.1; -; Genomic_DNA
EMBLCR354443; CAQ07002.1; -; Genomic_DNA
EMBLCR759761; CAQ10879.1; -; Genomic_DNA
EMBLCH471081; EAX03473.1; -; Genomic_DNA
EMBLBC112017; AAI12018.1; -; mRNA
EMBLBC112019; AAI12020.1; -; mRNA
CCDSCCDS4712.1; -; .
PIRA39459; A39459; .
RefSeqNP_001269314.1; NM_001282385.1; .
RefSeqNP_001311.3; NM_001320.6; .
UniGeneHs.73527; -; .
PDB1DS5; X-ray; 3.16 A; E/F/G/H=181-203
PDB1JWH; X-ray; 3.10 A; C/D=1-215
PDB1QF8; X-ray; 1.74 A; A/B=1-182
PDB3EED; X-ray; 2.80 A; A/B=1-193
PDB4DGL; X-ray; 3.00 A; A/B=1-215
PDB4MD7; X-ray; 3.10 A; A/B/C/D=1-215
PDB4MD8; X-ray; 3.30 A; A/B/C/D=1-215
PDB4MD9; X-ray; 3.50 A; A/B/C/D/I/J/N/O=1-215
PDB4NH1; X-ray; 3.30 A; C/D=1-215
PDBsum1DS5; -; .
PDBsum1JWH; -; .
PDBsum1QF8; -; .
PDBsum3EED; -; .
PDBsum4DGL; -; .
PDBsum4MD7; -; .
PDBsum4MD8; -; .
PDBsum4MD9; -; .
PDBsum4NH1; -; .
ProteinModelPortalP67870; -; .
SMRP67870; -; .
BioGrid107843; 266; .
DIPDIP-131N; -; .
IntActP67870; 197; .
MINTMINT-88683; -; .
STRING9606.ENSP00000365025; -; .
ChEMBLCHEMBL2358; -; .
iPTMnetP67870; -; .
PhosphoSitePlusP67870; -; .
DMDM54037520; -; .
EPDP67870; -; .
MaxQBP67870; -; .
PaxDbP67870; -; .
PeptideAtlasP67870; -; .
PRIDEP67870; -; .
DNASU1460; -; .
EnsemblENST00000375865; ENSP00000365025; ENSG00000204435; .
EnsemblENST00000375866; ENSP00000365026; ENSG00000204435; .
EnsemblENST00000375882; ENSP00000365042; ENSG00000204435; .
EnsemblENST00000383427; ENSP00000372919; ENSG00000206406; .
EnsemblENST00000383433; ENSP00000372925; ENSG00000206406; .
EnsemblENST00000400110; ENSP00000382980; ENSG00000206406; .
EnsemblENST00000412802; ENSP00000413469; ENSG00000224774; .
EnsemblENST00000418230; ENSP00000411322; ENSG00000228875; .
EnsemblENST00000422567; ENSP00000407018; ENSG00000224398; .
EnsemblENST00000429633; ENSP00000409510; ENSG00000230700; .
EnsemblENST00000431476; ENSP00000394855; ENSG00000224398; .
EnsemblENST00000436169; ENSP00000412520; ENSG00000224398; .
EnsemblENST00000443673; ENSP00000400188; ENSG00000230700; .
EnsemblENST00000448596; ENSP00000391038; ENSG00000232960; .
EnsemblENST00000451917; ENSP00000415303; ENSG00000224774; .
EnsemblENST00000452985; ENSP00000415237; ENSG00000228875; .
EnsemblENST00000453234; ENSP00000395275; ENSG00000224774; .
EnsemblENST00000454382; ENSP00000390900; ENSG00000232960; .
EnsemblENST00000454511; ENSP00000393756; ENSG00000232960; .
EnsemblENST00000455161; ENSP00000407379; ENSG00000230700; .
EnsemblENST00000458330; ENSP00000410802; ENSG00000228875; .
GeneID1460; -; .
KEGGhsa:1460; -; .
UCSCuc003nvr.3; human; .
CTD1460; -; .
DisGeNET1460; -; .
GeneCardsCSNK2B; -; .
HGNCHGNC:2460; CSNK2B; .
HPACAB004349; -; .
HPACAB013087; -; .
HPACAB016059; -; .
HPAHPA005944; -; .
MIM115441; gene; .
neXtProtNX_P67870; -; .
OpenTargetsENSG00000204435; -; .
PharmGKBPA26960; -; .
eggNOGKOG3092; Eukaryota; .
eggNOGCOG5041; LUCA; .
GeneTreeENSGT00390000003781; -; .
HOGENOMHOG000039270; -; .
HOVERGENHBG051131; -; .
InParanoidP67870; -; .
KOK03115; -; .
PhylomeDBP67870; -; .
TreeFamTF314462; -; .
ReactomeR-HSA-1483191; Synthesis of PC; .
ReactomeR-HSA-201688; WNT mediated activation of DVL; .
ReactomeR-HSA-2514853; Condensation of Prometaphase Chromosomes; .
ReactomeR-HSA-445144; Signal transduction by L1; .
ReactomeR-HSA-6798695; Neutrophil degranulation; .
ReactomeR-HSA-6804756; Regulation of TP53 Activity through Phosphorylation; .
ReactomeR-HSA-6814122; Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding; .
SignaLinkP67870; -; .
SIGNORP67870; -; .
EvolutionaryTraceP67870; -; .
GeneWikiCSNK2B; -; .
GenomeRNAi1460; -; .
PROPR:P67870; -; .
ProteomesUP000005640; Chromosome 6; .
BgeeENSG00000204435; -; .
CleanExHS_CSNK2B; -; .
ExpressionAtlasP67870; baseline and differential; .
GenevisibleP67870; HS; .
GOGO:0000785; C:chromatin; IEA:Ensembl; .
GOGO:0005929; C:cilium; IEA:Ensembl; .
GOGO:0005737; C:cytoplasm; IDA:BHF-UCL; .
GOGO:0005829; C:cytosol; TAS:Reactome; .
GOGO:0070062; C:extracellular exosome; IDA:UniProtKB; .
GOGO:0005576; C:extracellular region; TAS:Reactome; .
GOGO:1904813; C:ficolin-1-rich granule lumen; TAS:Reactome; .
GOGO:0016363; C:nuclear matrix; IEA:Ensembl; .
GOGO:0005654; C:nucleoplasm; TAS:Reactome; .
GOGO:0005634; C:nucleus; IDA:UniProtKB; .
GOGO:0005886; C:plasma membrane; IEA:Ensembl; .
GOGO:0005956; C:protein kinase CK2 complex; NAS:UniProtKB; .
GOGO:0034774; C:secretory granule lumen; TAS:Reactome; .
GOGO:0003682; F:chromatin binding; IDA:MGI; .
GOGO:0042802; F:identical protein binding; IPI:IntAct; .
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
GOGO:0019904; F:protein domain specific binding; IPI:UniProtKB; .
GOGO:0019887; F:protein kinase regulator activity; NAS:UniProtKB; .
GOGO:0005102; F:receptor binding; IPI:BHF-UCL; .
GOGO:0043021; F:ribonucleoprotein complex binding; IEA:Ensembl; .
GOGO:0008134; F:transcription factor binding; IPI:BHF-UCL; .
GOGO:0033211; P:adiponectin-activated signaling pathway; IDA:BHF-UCL; .
GOGO:0043623; P:cellular protein complex assembly; NAS:BHF-UCL; .
GOGO:0061154; P:endothelial tube morphogenesis; IMP:BHF-UCL; .
GOGO:0097421; P:liver regeneration; IEA:Ensembl; .
GOGO:0043537; P:negative regulation of blood vessel endothelial cell migration; IDA:BHF-UCL; .
GOGO:0008285; P:negative regulation of cell proliferation; TAS:BHF-UCL; .
GOGO:0043312; P:neutrophil degranulation; TAS:Reactome; .
GOGO:0006656; P:phosphatidylcholine biosynthetic process; TAS:Reactome; .
GOGO:0032927; P:positive regulation of activin receptor signaling pathway; IMP:BHF-UCL; .
GOGO:0010862; P:positive regulation of pathway-restricted SMAD protein phosphorylation; IDA:BHF-UCL; .
GOGO:0006457; P:protein folding; TAS:Reactome; .
GOGO:0006468; P:protein phosphorylation; IEA:GOC; .
GOGO:0051101; P:regulation of DNA binding; NAS:BHF-UCL; .
GOGO:1901796; P:regulation of signal transduction by p53 class mediator; TAS:Reactome; .
GOGO:0033574; P:response to testosterone; IEA:Ensembl; .
GOGO:0007165; P:signal transduction; TAS:UniProtKB; .
GOGO:0016055; P:Wnt signaling pathway; IEA:UniProtKB-KW; .
Gene3D1.10.1820.10; -; 1; .
Gene3D2.20.25.20; -; 1; .
InterProIPR016149; Casein_kin_II_reg-sub_a-hlx; .
InterProIPR016150; Casein_kin_II_reg-sub_b-sht; .
InterProIPR000704; Casein_kinase_II_reg-sub; .
PANTHERPTHR11740; PTHR11740; 1; .
PfamPF01214; CK_II_beta; 1; .
PRINTSPR00472; CASNKINASEII; .
SMARTSM01085; CK_II_beta; 1; .
SUPFAMSSF57798; SSF57798; 1; .
PROSITEPS01101; CK2_BETA; 1; .



USC-OGP 2-DE database image


Gateways to other related servers


Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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